Python-3.5.2-foss-2016b-fh1

Package List

• APScheduler-3.2.0 In-process task scheduler with Cron-like capabilities
• Babel-2.3.4 Internationalization utilities
• Cython-0.23.4 The Cython compiler for writing C extensions for the Python language.
• Flask-0.11.1 A simple framework for building complex web applications.
• Flask-Bootstrap-3.3.6.0 An extension that includes Bootstrap in your project, without any boilerplate code.
• Flask-Debug-0.4.3 Shows reflection/configuration to aid the development of Flask applications.
• Flask-Migrate-2.0.0 SQLAlchemy database migrations for Flask applications using Alembic
• Flask-SQLAlchemy-2.1 Adds SQLAlchemy support to your Flask application
• Flask-Script-2.0.5 Scripting support for Flask
• Flask-WTF-0.12 Simple integration of Flask and WTForms.
• Jinja2-2.8 A small but fast and easy to use stand-alone template engine written in pure python.
• Mako-1.0.4 A super-fast templating language that borrows the best ideas from the existing templating languages.
• Markdown-2.6.6 Python implementation of Markdown.
• Nuitka-0.5.20 Python compiler with full language support and CPython compatibility
• PrettyTable-0.7.2 A simple Python library for easily displaying tabular data in a visually appealing ASCII table format.
• PyClone 0.12.9
• PyDP 0.2.2
• PyMySQL-0.7.6 Pure Python MySQL Driver
• PyYAML-3.11 YAML parser and emitter for Python
• Pygments-2.1.3 Pygments is a syntax highlighting package written in Python.
• SQLAlchemy-1.0.14 Database Abstraction Library
• appdirs-1.4.0 A small Python module for determining appropriate platform-specific dirs, e.g. a “user data dir”.
• arff-2.1.0 Python package for reading and writing Weka arff files
• argparse-1.4.0 Python command-line parsing library
• astroid-1.4.8 A abstract syntax tree for Python with inference support.
• backports.shutil-get-terminal-size-1.0.0 A backport of the get_terminal_size function from Python 3.3’s shutil.
• beautifulsoup4-4.5.1 Screen-scraping library
• biopython-1.66 Freely available tools for computational molecular biology.
• bitstring-3.1.5 Simple construction, analysis and modification of binary data.
• blist-1.3.6 a list-like type with better asymptotic performance and similar performance on small lists
• bokeh-0.12.1 Interactive plots and applications in the browser from Python
• boto3-1.4.0 The AWS SDK for Python
• changeo-0.3.3 A bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data.
• cliff-2.2.0 Command Line Interface Formulation Framework
• cryptography-1.4 cryptography is a package which provides cryptographic recipes and primitives to Python developers.
• cycler-0.10.0 Composable style cycles
• darkslide-2.3.3 Lightweight markup language-based html5 slideshow generator. Forked from Landslide.
• dask-0.11.0 Parallel PyData with Task Scheduling
• deap-1.0.2 Distributed Evolutionary Algorithms in Python
• debtcollector-1.8.0 A collection of Python deprecation patterns and strategies that help you collect your technical debt in a non-destructive manner.
• decorator-4.0.10 Better living through Python with decorators
• deepTools-2.3.3 Useful tools for exploring deep sequencing data
• docutils-0.12 Docutils – Python Documentation Utilities
• drmaa-0.7.6 a python DRMAA library
• ecdsa-0.13 ECDSA cryptographic signature library (pure python)
• enum34-1.1.2 Python 3.4 Enum backported to 3.3, 3.2, 3.1, 2.7, 2.6, 2.5, and 2.4
• flask-appconfig-0.11.1 Configures Flask applications in a canonical way. Also auto-configures Heroku. Aims to standardize configuration.
• flask-nav-0.5 Easily create navigation for Flask applications.
• freezer-3.0.0.0b2 The OpenStack Backup Restore and Disaster Recovery as a Service Platform
• funcsigs-1.0.2 Python function signatures from PEP362 for Python 2.6, 2.7 and 3.2+
• github3.py-1.0.0a4 Python wrapper for the GitHub API(http://developer.github.com/v3)
• google-1.9.3 Python bindings to the Google search engine.
• h5py-2.6.0 Read and write HDF5 files from Python
• html5lib-0.999999999 HTML parser based on the WHATWG HTML specification
• ipython_genutils-0.1.0 Vestigial utilities from IPython
• iso8601-0.1.11 Simple module to parse ISO 8601 dates
• keystoneauth1-2.12.0 Authentication Library for OpenStack Identity
• ldap3-1.4.0 A strictly RFC 4510 conforming LDAP V3 pure Python client library
• lockfile-0.12.2 Platform-independent file locking module
• matplotlib-1.5.2 Python plotting package
• mock-2.0.0 Rolling backport of unittest.mock for all Pythons
• monotonic-1.2 An implementation of time.monotonic() for Python 2 & < 3.3
• mpi4py-1.3.1 Python bindings for MPI
• msgpack-python-0.4.8 MessagePack (de)serializer.
• netaddr-0.7.18 A network address manipulation library for Python
• netifaces-0.10.5 Portable network interface information.
• nose-1.3.7 nose extends unittest to make testing easier
• npyscreen-4.10.5 Writing user interfaces without all that ugly mucking about in hyperspace
• numpy-1.11.1 NumPy: array processing for numbers, strings, records, and objects.
• oauth-1.0.1 Library for OAuth version 1.0a.
• ont-fast5-api-0.3.2 Oxford Nanopore Technologies fast5 API software
• openstacksdk-0.9.3 An SDK for building applications to work with OpenStack
• os-client-config-1.20.1 OpenStack Client Configuation Library
• osc-lib-1.0.2 OpenStackClient Library
• oslo.concurrency-3.14.0 Oslo Concurrency library
• oslo.config-3.16.0 Oslo Configuration API
• oslo.context-2.9.0 Oslo Context library
• oslo.i18n-3.9.0 Oslo i18n library
• oslo.log-3.15.0 oslo.log library
• oslo.serialization-2.13.0 Oslo Serialization library
• oslo.utils-3.16.0 Oslo Utility library
• pandas-0.18.1 Powerful data structures for data analysis, time series, and statistics
• paramiko-2.0.2 SSH2 protocol library
• paycheck-1.0.2 A Python QuickCheck implementation
• pbr-1.10.0 Python Build Reasonableness
• pickleshare-0.7.4 Tiny ‘shelve’-like database with concurrency support
• pip-8.1.2 The PyPA recommended tool for installing Python packages.
• porechop 0.2.0
• positional-1.1.1 Library to enforce positional or key-word arguments (deprecated/unmaintained)
• presto-0.5.2 A bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data.
• prompt_toolkit-1.0.7 Library for building powerful interactive command lines in Python
• psycopg2-2.6.2 psycopg2 - Python-PostgreSQL Database Adapter
• pyasn1-0.1.9 ASN.1 types and codecs
• pycrypto-2.6.1 Cryptographic modules for Python.
• pycurl-7.43.0 PycURL – A Python Interface To The cURL library
• pymongo-3.3.0 Python driver for MongoDB http://www.mongodb.org
• pymssql-2.1.3 DB-API interface to Microsoft SQL Server for Python. (new Cython-based version)
• pypandoc-1.2.0 Thin wrapper for pandoc.
• pyparsing-2.1.8 Python parsing module
• pysam-0.9.1.4 pysam
• python-cinderclient-1.8.0 OpenStack Block Storage API Client Library
• python-dateutil-2.5.3 Extensions to the standard Python datetime module
• python-glanceclient-2.5.0 OpenStack Image API Client Library
• python-keystoneclient-3.4.0 Client Library for OpenStack Identity
• python-novaclient-5.1.0 Client library for OpenStack Compute API
• python-openstackclient-3.0.1 OpenStack Command-line Client
• python-pam-1.8.2 Python PAM module using ctypes, py3/py2
• python-swiftclient-3.0.0 OpenStack Object Storage API Client Library
• pytz-2016.6.1 World timezone definitions, modern and historical
• qrcode-5.3 QR Code image generator
• requests-2.11.1 Python HTTP for Humans.
• requestsexceptions-1.1.3 Import exceptions from potentially bundled packages in requests.
• rfc3986-0.4.1 Validating URI References per RFC 3986
• rpy2-2.8.2 Python interface to the R language (embedded R)
• scipy-0.17.1 SciPy: Scientific Library for Python
• setuptools-26.0.0 Easily download, build, install, upgrade, and uninstall Python packages
• simplegeneric-0.8.1 Simple generic functions (similar to Python’s own len(), pickle.dump(), etc.)
• simplejson-3.8.2 Simple, fast, extensible JSON encoder/decoder for Python
• six-1.10.0 Python 2 and 3 compatibility utilities
• stevedore-1.17.1 Manage dynamic plugins for Python applications
• traitlets-4.2.2 Traitlets Python config system
• twobitreader-3.1.4 A fast python package for reading .2bit files (used by the UCSC genome browser)
• tzlocal-1.2.2 tzinfo object for the local timezone
• uritemplate.py-2.0.0 URI templates
• urwid-1.3.1 A full-featured console (xterm et al.) user interface library
• utils-0.9.0 Python Distribution Utilities
• virtualenv-15.0.3 Virtual Python Environment builder
• warlock-1.3.0 Python object model built on JSON schema and JSON patch.
• watchdog-0.8.3 Filesystem events monitoring
• wrapt-1.10.8 Module for decorators, wrappers and monkey patching.