cellranger-3.0.2

Chromium Single Cell Software Suite is a set of software applications for analyzing and visualizing single cell 3’ RNA-seq data produced by the 10x Genomics Chromium Platform.

Project Homepage: cellranger

Reference data for Cell Ranger is located here: /shared/biodata/ngs/Reference/10X

Available reference files:

• refdata-cellranger-GRCh38-3.0.0
• refdata-cellranger-hg19-3.0.0
• refdata-cellranger-mm10-3.0.0

Usage:

module load cellranger/3.0.2