PPanGGOLiN Partitions

The map of the clustered nodes for Fusobacterium nucleatum subspecies animalis in genomic context.

Notes:

  • This map contains only the shell and persistent partitions. The cloud partition is excluded.

Instructions:

  • Hover over nodes to reveal the node name and product annotation
  • Zoom in using the mouse or the magnifying glass icons at the bottom of the screen (The glass icon with no + or - will set the view back to the original view)
  • Move up and down, left and right, using the arrow keys
  • Use the search box in the legend on the left to search for node names and groups of interest
  • The drop down box will show only one of the following partitions at a time
  • Click on the "x" in the top right hand list to go back to the original screen with all groups

Color code for Fusobacterium nucleatum subspecies animalis (Fna) Gene Clusters:

Group 1: Persistent or Core Gene Clusters
Group 2: Fna Clade 1 (Fna C1) Gene Clusters
Group 3: Fna Clade 2 (Fna C2) Gene Clusters